Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807702.1_cds_XP_016494938.1_9304
CDS Infomation

[gene=LOC107814120] [db_xref=GeneID:107814120] [protein=aspartic proteinase-like protein 2] [protein_id=XP_016494938.1] [location=complement(join(23279..23493,23639..23710,25122..25185,25317..25413,25511..25584,26935..27097,28857..29084,30169..30401,30511..30640,31790..32064))] [gbkey=CDS]
Sequence

ATGCTGGAAACAACTGGAAATTGCATGAAGTTGTTGATGATGGTGACGGCGGTTATAGCC
GCTTTAACTATCGCCGCTGCCAAAGACGGCGCGGTAGGGGGGAATGTTCCGGCGAGGGTA
CTGAACTTGGAAAGAGTGTTGCCTCTGAATCATAAGGTGGAGTTGGAGAAGCTTATAGCT
AGAGACCGAGCTAGGCACGCTCAAATTTTGCAGAATTTCGCCGGCGGAGTCGTCGATTTT
CCAGTTATAGGTTCCTCCGACCAATTTCTCTTCGGCCTTTATTATACAAAAGTAAAACTG
GGATCTCCACCAAGAGAATACGATGTGCAGATTGATACTGGAAGCGATATCTTGTGGGTT
ACATGTCGTTCCTGCAACAATTGTCCTCAAACAAGTGGACTTGGGGTTGAGCTCAACTTC
TATGACACTGCGATCTCATCAACTTCATCTCTCATCTCTTGTTCAGACCCAATGTGTGCT
TCAACTGAGTGCTCTAGTGAAACAAATCAGTGTGCTTACACCTTTCGTTACGGAGATGGG
AGTGGCACAACTGGCTATTACGTGTCAGATTTATTATATTTTGACACATTCGTCGCAACC
TCGCTGATTGCCAACTCTTCAGCACCAATTGTTTTTGGGTGCAGTACCTCTCAGTCTGGG
GACCTGACCCAGATGGATAGAGCAATTGATGGGATTTTTGGGTTTGGTCCACAGGACCTT
TCAGTAATATCTCAACTGTCTGCACGCGGAATTTCTCCAAAAGTGTTTTCACATTGTTTG
AAAGGAGAGGGCAATGGTGGAGGTATACTAGTTCTTGGTGAGATTTTGAATCCGAGCATC
GTTTATAGTCCCCTTGTTCCGTCACAGGGTCATTACAATGTATATATACAGAGCATTGCC
GTCAATGGGCAAACTTTGCCTGTTGATCCAGCAGTTTTTGCCAGCTCTGGTGATCGAGGA
ACCATTGTTGATTCTGGTACAACTTTAGCTTATCTTACCGCAGAAGCTTATGAACCCTTT
GTCAATGCTATAACTGCCGCCGTTTCACCTTCAGCCAGGCTAGTCATATCAGGAAGAAAG
CCGTGCTATCTAGTTTCCTCAAGCATATCCGATATGTTTCCTCCAGTTTCTCTAAACTTT
GCTGGTGGTGCATCCATGGATTTAAGACCTTCGGACTACCTTGTGCATATGGGCTTTTAT
GAAGGTGCTGCTATGTGGTGCATTGGCTTTCAAAGAGATGATGCAGGCGTAACAATTTTA
GGAGATCTTGTTCTTAAAGATAAGATCATTGTATATGACTTGGCTCGCAAAAGAATTGGA
TGGGCAGATTATGATTGTTCATCACCTGTGAATGTTTCTACAACCTCTGGCAAGGATGAA
TTTATCAATGCTGGACAATTAAGTGTGAGCAGCTCATCAAGCAGGGTGTACTTCAATCTG
CGGCATGCTAGAACTAATGCTCGTCGTTTACTTTTTTTGGTGCTGATGATAGGTTTCCCA
TTTTGTAGCTTGACTTCAGTTTTATCTTGCTATTTTTTCCTCAATATTTGA

Peptide Sequence

PEP ID

XP_016494938.1
PEP Infomation

PREDICTED: aspartic proteinase-like protein 2 [Nicotiana tabacum]
Sequence

MLETTGNCMKLLMMVTAVIAALTIAAAKDGAVGGNVPARVLNLERVLPLNHKVELEKLIA
RDRARHAQILQNFAGGVVDFPVIGSSDQFLFGLYYTKVKLGSPPREYDVQIDTGSDILWV
TCRSCNNCPQTSGLGVELNFYDTAISSTSSLISCSDPMCASTECSSETNQCAYTFRYGDG
SGTTGYYVSDLLYFDTFVATSLIANSSAPIVFGCSTSQSGDLTQMDRAIDGIFGFGPQDL
SVISQLSARGISPKVFSHCLKGEGNGGGILVLGEILNPSIVYSPLVPSQGHYNVYIQSIA
VNGQTLPVDPAVFASSGDRGTIVDSGTTLAYLTAEAYEPFVNAITAAVSPSARLVISGRK
PCYLVSSSISDMFPPVSLNFAGGASMDLRPSDYLVHMGFYEGAAMWCIGFQRDDAGVTIL
GDLVLKDKIIVYDLARKRIGWADYDCSSPVNVSTTSGKDEFINAGQLSVSSSSSRVYFNL
RHARTNARRLLFLVLMIGFPFCSLTSVLSCYFFLNI

Transcript Sequence

Gene sequence data has not been registered.